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Versioning and Releases

The California Department of Public Health has clinically validated the following versions:

  • v1.2.2 for WGS, and
  • v1.4.4.8 for tNGS

Interpretation documents for v1.2.2 and v1.4.4.8 are available in the root directory of the tbp-parser repository; others are available in the interpretation_docs directory on GitHub.

If you are running tbp-parser as part of the TheiaProk pipeline(s) with Terra, the following branches are recommended:

  • To run v1.2.2 on Terra, please use the smw-tb-2024-01-16-dev branch.
  • To run v1.4.4.8+ and v1.6.x+, please use the smw-tb-2024-05-03-dev branch.
  • To run v1.5.x+ and v2.x+, please use the smw-tb-2024-05-03-who2-dev branch.

For more information on the differences between versions, you can see the Brief Description of Versions or the Exhaustive List of Versions.